Monday, May 7, 2012

Ocean acidification and deep sea communities: can past events provide clues to future responses?



Ocean acidification: the other carbon problem
Ocean acidification (OA) is one of the largest issues resulting from anthropogenic pumping of CO₂into the atmosphere. CO₂in the atmosphere dissolves into oceans, leading to a decrease in pH (called the bicarbonate buffer system):

CO₂+H₂O ↔ H₂CO₃ ↔ HCO₃¯+H⁺ ↔ CO₃¯+H⁺
Atmospheric CO₂doubling will likely lower pH of the entire ocean > 0.1 unit. The normal variation of pH in open seawater (7.6𔃆.2), so .1 units is very significant.


Effects on marine organisms include physiological responses (regulating acid-base imbalance) as well a dissolution of calcium carbonate support structures like shells, tests, or exoskeletons as saturation horizons rise. It is possible deep sea organisms may be particularly vulnerable. For example, the internal control of pH is critical for proper physiological functioning, so many organisms have evolved elaborate methods to regulate internal pH. However, the pH in most of the deep sea is stable over thousands of years, so deep sea organisms have not needed methods to rapidly adapt to or regulate changes in pH. Ocean acidification may be too fast for these deep sea organisms to adapt to (Seibel and Walsh, 2002).


Changes in carbonate saturation horizons are one of the biggest worries when people talk about effects of OA on organisms. The solubility of calcium carbonate (CaCO₃) increases with decreasing temperature and increasing pressure. In the north Pacific, the rate of rise for aragonite saturation horizon is around 1 m y¯¹. At atmospheric CO₂ = 780 ppm (near the end of this century), the subarctic North Pacific and Southern Ocean will be undersaturated with respect to aragonite (Fabry et al., 2008; Feely et al., 2006; Orr et al., 2005.) Major planktonic calcium carbonate producers like coccolithophores, foraminifera, and euthecosomatous pteropods (organisms responsible for nearly all the export flux of calcium carbonate to the deep sea) may be at risk as well. In lab studies, foraminifera and pteropods for example showed possible reduced calcification with decreasing pH (Feely et al., 2004; Orr et al., 2005).
 So to be blunt, this is bad.

But what is going to happen? Is there another way, besides controlled laboratory experiments, to gauge where the ocean is headed? Other than just sitting and waiting around to see what happens, I mean.

We could look to the past.

The Paleocene-Eocene Thermal Maximum
About 55 million years ago, sea surface temperatures rose rapidly, about 5-10°C in only a thousand years. This rapid warming was likely due to increases in greenhouse forcing, just like today. Rather than anthropogenic however, this rapid influx of carbon to the atmosphere may have come from methane hydrates at the bottom of the ocean. For those of you who are isotopically inclined, δ¹³C records from deep sea sediment cores show a rapid initial decrease (around 20,000 years) followed by a gradual recovery (~130,000 years) back to similar δ¹³C values found before the excursion. The magnitude of the drop in δ¹³C values (-3‰) suggest the carbon source was very depleted in 13C, pointing to methane hydrates as the likely source. This carbon isotope excursion was the signature of the Paleocene-Eocene Thermal Maximum (PETM) (Zachos et al., 2005).
Part of influx of CO2 to the atmosphere dissolved into the oceans, lowering pH. This resulted in a rise in the lysocline and calcite compensation depth (CCD) which promoted the dissolution of seafloor carbonate. The CCD shoaled over 2 km within just a few thousand years, but recovery was gradual, around 60,000 years. Ultimately this CO2 would be sequestered through chemical weathering of silicate rocks (Zachos et al., 2005).

All marine communities experienced major changes, including migrations to higher latitudes, evolutionary radiations, and extinctions. There were also distinct responses between planktonic and benthic organisms. Planktonic organisms weren't particularly affected, but did experience radiation and diversification. However for benthic organisms, the PETM marked the largest extinction event in the last 90 million years. 30 to 50% of benthic species became extinct. It's important to keep in mind that gauging PETM effects on marine ecosystems relies entirely on microfossils, as no macroinvertibrate fossils have been described (Rodriguez-Tovar et al., 2011; McInerney and Wing, 2011).

Surprisingly, the driving force affecting these organisms may have been temperature rather than ocean acidification. Temperature affects bottom water oxygenation and increases metabolic rates, meaning organisms need more food to maintain base metabolism (McInerney and Wing, 2011).

Applicability?
Can we expect to see similar responses from marine organisms today? How similar was the PETM to today's global warming/ ocean acidification problem? It turns out we are likely in for much worse. for one, the rate of carbon input was much different. In the PETM, carbon was input to the atmosphere over an 8,000 year period. Contrast that with our pumping CO2 into the atmosphere over a mere 300 years. That's less than the mixing time of the ocean. The longer CO2 input rate during the PETM meant less severe acidification and carbonate dissolution in the surface ocean.

Something else to consider: there was no ice during the PETM. No glaciers, snow. Nothing. No ice means no ice/albedo feedback (warming leads to melting of ice, revealing darker surfaces which absorb more heat, leading to more warming) which means an absence of greater warming at polar latitudes. In contrast, the most drastic warming today is at the poles (McInerney and Wing, 2011; Ridgwell and Schmidt, 2010).
Check out this video:
We are heading for something unprecedented. The PETM at best provides a framework for the mimimum damage today's anthropogenically induced problems will cause deep sea marine life.
Helpful link:                                 

Tuesday, May 1, 2012

Nike Lowers Pro


The contest is on and it looks amazing. My only comment: Julian should have won. Period. I don't care about an interference. He killed it. Judges need to swallow their ridiculous egos and let people surf.

check it out now:
http://www.nikelowerspro.com/live/

Monday, April 30, 2012

Puke shoes



My roommate CJ is an amazing musician. Check out her latest collaboration with her bro!

Thursday, April 26, 2012

Dog Days

My dad took my dog, Dodger, to the vet last weekend and found he had a tumor. The vet said that nothing could be done and gave Dodger two months tops. I grew up with Dodger. When I was little he'd sleep on my bed every night. In the morning my parents would find Dodger stretched out on the bed while I curled into the last corner he hadn't taken up. I guess what I'm saying is we've got some history.

So I'm dedicating these next two months to my dog. I'm going to take him everywhere, let him in the house whenever he wants, and while I might not let him sleep on the same bed as me (he's got some bladder issues) I'm going to give him the time of his life.

Yesterday I took him and my other dog Kekoa to the park near our house. It wasn't far but we drove anyway, the hills are a little rough for Dodger. We spend the afternoon lounging around the park, the dogs roaming and sniffing things and occasionally returning to me just to touch base. I pulled out a book and eventually Dodger came back and lay next to me. It was an amazing day and while it made me happy, I couldn't help but feel sad every once in a while when I looked at Dodger.






Update: This is now Dodger's last week. The tumor has been growing really fast and he hasn't been feeling very good. He's been getting extra special doggie treats and has complete run of the house. Whatever he wants is his! I'm going to miss him so much but I know he has had a good life.

Tuesday, April 17, 2012

It's official!


Now it feels real. Finally! I have a Bachelor's degree. And with only a few months to spare before I start my Masters work at UH Manoa. This absolutely made my day.

Thursday, April 12, 2012

Flat Stanley's last days in Hawaii

On Flat Stanley's last few days in Hawaii, I took him to my parents' house (Kawena's grandparents, Kiki and Gramps). Stanley visited with my dog Kekoa, who was unsure of Stanley at first but warmed up to him. 



 My parents' house has a direct view of my favorite surf spot on Oahu, whos name I will leave anonymous. It's one of the few places on the south side that no one really knows about or surfs. As usual, it was sunny and beautiful.




These shells were collected over the years by my grandmother and grandfather when they lived on the east side of Oahu

Checking the surf one last time.
==
Did I mention I have a rabbit?


And she likes Stanley.
Bye Stanley!!!!!
Bye Stanley

Flat Stanley in Waikiki

 I took Flat Stanley to check the surf with me in Waikiki. The waves were pretty small but conditions were beautiful. Sunny and light wind. We checked some of our favorite spots. Bowls, Bomburas, Kewalos, and finally setttled on Point Panic. It is a bodysurfing only spot, so we had to be sneaky.
Diamond Head in the background

Checking Bomburas


It's flat!
The surf was fun. Again Stanley had to watch from the beach, but he had a nice tour of the south side of Oahu!

Friday, April 6, 2012

Flat Stanley on the North Shore

We took Flat Stanley to the north shore of Oahu, one of the most famous surfing destinations in the world. Here he is at Mokule'ia.





Friday, March 30, 2012

The Adventures of Flat Stanley

My niece Kawena sent over Flat Stanley in February. Clad in an Aloha shirt and carrying a suitcase, I took him all around the island of Oahu. One of the first places we went was the west side, to a beach called Makaha. It's one of my favorite places to surf, and this day was really fun! The waves were about head high and it was pretty packed since just about everyone goes to Makaha when there is a west swell. Of course Stanley couldn't surf with me, but he had some fun on the sand.




On another day, I took Stanley into the lab with me. I work in a marine biology lab. One part of my work is to catch fish in the wild and look in their stomachs to see what they've been eating.




The fish in the picture below is an opah, a moonfish. It lives in really deep water out in the open ocean and is a really popular fish to eat here in Hawaii. My friend had been looking at their stomachs and saw only... mushy stuff. Now that might not seem weird until you look at their mouths. They have essentially no teeth! Their mouths are like vacuums, just sucking up their prey (usually fish). So you would expect their stomachs to house whole fish! But nope, just mushy stuff. We started wondering if they were actually eating jellyfish.


We decided to look a little deeper. We could feel this rough patch of something deep in the throat of this fish. When we looked, we found rows and rows of small sharp teeth, pointed inward towards the stomach. Imagine having teeth in the bottom of your throat! We are guessing these opah suction fish into their stomachs and these sharp teeth prevent the fish from swimming back out. Anyway, Stanley was there watching this whole discovery.



More Stanley adventures to come!

Sunday, February 26, 2012

The Oceans Sciences Conference 2012, Salt Lake City, Utah

My first conference! Oh, and I gave a talk! Maybe you missed that. I got the incredible opportunity to present my research at a major international conference. Needless to say I was excited... but mostly terribly nervous.
I submitted my abstract in October, with the full anticipation that I'd be assigned a poster. It's not very common for an undergrad to get a talk, so I wasn't expecting much. Honestly I just hoped my abstract would be accepted. In November I got the email that I was given a speaker slot, and I was instantaneously on cloud-9. But as November melted into December and December into January, the nerves started to take hold. I was going to be surrounded by these pillars of science, the experts that I cite endlessly in any paper or presentation. I needed to prepare. 
Flying in to Salt Lake City
I got into Salt Lake City last Saturday, not nearly as prepared as I wanted to be. On the plane over, I suddenly got this crazed new idea for the direction I wanted to go in, and began completely reorganizing my talk. This was probably not a good idea. So night one consisted of me endlessly tweaking my talk.

On Sunday, with fresh powder on the ground, my advisor, another researcher, and I decided to go skiing. Avoid the stress of my talk for a couple hours (maybe it was just procrastination). My advisor and his colleague were originally from the mainland and had been skiing since forever. In contrast, this would be the third time I had ever seen snow. I had been snowboarding once before so I stuck with that. The geography was incredible on the way up to Brighton.
Heading up to Brighton
Snowboarding was incredibly fun but also pretty painful. I managed to not fall getting off the lifts, but that's just about the only place I didn't fall. Trying to keep up with two experienced skiers is not the safest thing to do when you're on a snowboard for the second time in your entire life. I would get into the flow of it, get some good speed, then promptly catch an edge and fall. I fell pretty hard a couple of times, but I just kept wanting to go fast. By the third run, my advisor and his friend had ditched me and I was on my own, so I plugged in my iPod and just listened to music for the rest of the day as I explored the runs. Music and snowboarding is so much better than just snowboarding. It was more fun and I felt like I fell less for some reason. I'd just tune out and then suddenly I'd be at the bottom of the hill, lining up for the lift again.

Starting out...

Something a little steeper. 
Heading back to the city
That night a number of my labmates flew in so the house quickly became filled. And by filled I mean overbooked. Some of us had to sleep two to a bed (luckily they were queen sized beds!). Everyone was some combination of excited, nervous, and jet-lagged. For dinner we grilled up some sort of pork, some flounder, asparagus, and potatoes. Being the 'rabbit' that I am, I stuck with the veggies. 

Day 1 of the conference was exciting! The Salt Palace Convention Center is huge and I spent most of the morning wandering around various ballrooms. Thousands of people were in attendance, filling in and out of ballrooms as they attempted to see every talk of interest. This was impossible to me as so many cool talks were going on at the same time. I sat in on a session entitled "137: Biodiversity, Biogeochemistry and Ecology: Establishing Linkages Between Molecular Diversity and Ecosystem Functioning" and another called: "004: The Southern Ocean and Its Role in the Climate System."

Sitting in one of the talks...

Massive poster sessions!
Days 2 and 3 were a blur. Endlessly sitting in talks, then frantically speeding to the next one in the ballroom across the entire building. Day 3, Wednesday, was filled with plenary talks an there was a really interesting one about shark conservation and the impacts of the shark fin soup industry. 

Day 4. Before I knew it, Thursday was here. The day of my talk. There was an entire session devoted to the type of work I'd be presenting: compound specific isotope analysis of amino acids (AA-CSIA): 123: Compound-specific amino acid analysis: a rapidly evolving tool for ecology, paleoceanography and biogeochemical cycle research. The line up of speakers was amazing. Marylin Fogel, the opening speaker, basically pioneered this entire method over 20 years ago. Other big names included Matt McCarthy, Yoshito Chikaraishi, and my advisor Brian Popp. Put simply, this room was filled with anyone who understood the AA-CSIA method. And here I was, fresh out of my undergraduate life, with a B.S. in Global Environmental Science. The talks started at 8:00 am and I didn't talk until 10:45, so I had plenty of time to work up my nerves. I had to keep telling myself to think of Max (a dog) who lives a stress free life. 

On top of the sheer stress that comes from having to give a presentation to an audience of experts, I had two additional reasons to worry:

1) Both of my prospective advisors for grad school were in attendance, so this almost felt like a job interview. 

2) My talk was essentially going against everything that the guy presenting before me was supporting. And the guy before me was Yoshito Chikaraishi, one of the biggest names in this type of science. 

But you know what, I did it! I could feel my voice shaking a bit, but it wasn't bad. I knew my stuff and I could feel the repetition taking over as I settled into it. And I did alright! I didn't really get any difficult questions after, so I felt pretty good. After I sat back down, all the adrenaline left and I suddenly felt exhausted yet elated. It was over!

The poster session started at 4 pm every day and there was free beer for the first hour. I hadn't really taken advantage of this until now. I had to celebrate!
Title slide of my talk
The end of Friday's sessions at 4 pm marked the close of my first conference. It was a rush. A crazed, stressful, amazing rush. Now it's on to writing an abstract for an upcoming conference! It never ends. 

Here are some pics of the city: 

Mormon temple

The capitol building

Inside the capitol building
Beautiful ceiling, Capitol building

View from the top! Salt Lake City

See you at the next conference!